Commits · 66bfd0a8edfc4fad01c4c7c98dfcda2661ce2a21 · Nikos Pappas / pvogs_function

Mar 02, 2021
- Merge branch 'revert-63eae420 ' into 'master' · 66bfd0a8
  Nikos Pappas authored 4 years ago
  
  Revert "auc to AUROC" See merge request !1
  66bfd0a8
- Revert "auc to AUROC" · 3fe64346
  Nikos Pappas authored 4 years ago
  
  This reverts commit 63eae420
  3fe64346
- auc to AUROC · 63eae420
  Nikos Pappas authored 4 years ago
  
  63eae420
- Merge branch 'master' of git.science.uu.nl:papanikos/pvogs_function into master · f3812649
  Nikos Pappas authored 4 years ago
  
  f3812649
- added supplement table 1 · 7ec9c8e9
  Nikos Pappas authored 4 years ago
  
  7ec9c8e9
Mar 01, 2021
- data do no trigger full execution · eead43bc
  Nikos Pappas authored 4 years ago
  
  eead43bc
- fix missing dict definition · a2a92483
  Nikos Pappas authored 4 years ago
  
  a2a92483
- remove redundant print · d5b2419e
  Nikos Pappas authored 4 years ago
  
  d5b2419e
- remove empty line · c6aa1b06
  Nikos Pappas authored 4 years ago
  
  c6aa1b06
- fix key for value retrieval · d0a6fe58
  Nikos Pappas authored 4 years ago
  
  d0a6fe58
- output to log files · dc63885e
  Nikos Pappas authored 4 years ago
  
  dc63885e
- update slicing to handle bitscores and evalues · 94fe8f4d
  Nikos Pappas authored 4 years ago
  
  94fe8f4d
- report bitscore and evalues for hits · 36213934
  Nikos Pappas authored 4 years ago
  
  36213934
Feb 04, 2021
- include the figure in the workflow · c5cb2e21
  Nikos Pappas authored 4 years ago
  
  c5cb2e21
- added calculations for pvogs annotations · ee19d5ee
  Nikos Pappas authored 4 years ago
  
  ee19d5ee
- change pallettes to colorblind · d4f88e2c
  Nikos Pappas authored 4 years ago
  
  d4f88e2c
- adjust notebook rule · 8f85f171
  Nikos Pappas authored 4 years ago
  
  8f85f171
- restructure readme · 766fbd37
  Nikos Pappas authored 4 years ago
  
  766fbd37
- remove old notebook · a3ce4623
  Nikos Pappas authored 4 years ago
  
  a3ce4623
- update analysis notebook · 331b8a69
  Nikos Pappas authored 4 years ago
  
  331b8a69
Feb 03, 2021
- Revert "change the notebook" · fa8e9d96
  Nikos Pappas authored 4 years ago
  
  This reverts commit 4d4bb547
  fa8e9d96
- change the notebook · 4d4bb547
  Nikos Pappas authored 4 years ago
  
  4d4bb547
- update seaborn only · dd412876
  Nikos Pappas authored 4 years ago
  
  dd412876
- reformatting, cleanup · 8bfaaafc
  Nikos Pappas authored 4 years ago
  
  8bfaaafc
- tab reformatting · f4f29eea
  Nikos Pappas authored 4 years ago
  
  f4f29eea
- tab formatting · f3242399
  Nikos Pappas authored 4 years ago
  
  f3242399
- update seaborn, full specs for jupyter env · 38cf98a6
  Nikos Pappas authored 4 years ago
  
  38cf98a6
Oct 15, 2020
- update git address · 2d63506c
  Nikos Pappas authored 4 years ago
  
  2d63506c
- Merge branch 'master' of git.science.uu.nl:n.pappas/pvogs_function · 70b1948c
  Nikos Pappas authored 4 years ago
  
  70b1948c
- used config file · 0573878d
  Nikos Pappas authored 4 years ago
  
  0573878d
- update snakemake version · c6d83431
  Nikos Pappas authored 4 years ago
  
  c6d83431
Sep 23, 2020
- update to point release with actual fix · 0c331cd0
  Nikos Pappas authored 4 years ago
  
  0c331cd0
Sep 18, 2020
- make predict rule threads configurable · bd6d9a28
  Nikos Pappas authored 4 years ago
  
  bd6d9a28
- hide logs for master snakefile too · 4606b975
  Nikos Pappas authored 4 years ago
  
  4606b975
- hide logs dir to .logs · 7e2e18c9
  Nikos Pappas authored 4 years ago
  
  7e2e18c9
- bump snakemake version to 5.24 for the pulp debug fix · 3579053c
  Nikos Pappas authored 4 years ago
  
  3579053c
- update environment for modern git version · 0c9bde07
  Nikos Pappas authored 4 years ago
  
  0c9bde07
Sep 15, 2020
- remove X server description for ete3 from README · 48f8c2ff
  Nikos Pappas authored 4 years ago
  
  48f8c2ff
- add reference to github issue · 4c0d48b7
  Nikos Pappas authored 4 years ago
  
  4c0d48b7
- fix qt error when plotting with no screen available · fd44d639
  Nikos Pappas authored 4 years ago
  
  fd44d639