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Commit e30c4041 authored by Nikos Pappas's avatar Nikos Pappas
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added short contig flag for vhmnet

parent a641cda4
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......@@ -161,6 +161,7 @@ rule run_vhmnet:
shell:
"VirHostMatcher-Net.py -q {params.fasta_dir} "
"-t {threads} "
"--short-contig "
"-i {params.tmp_dir} "
"-d {params.data_dir} "
"-q {params.fasta_dir} "
......
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