chore: added instructions to readme

src/manual_mode/README.md

 
 
-To run a neo4j db container locally
+# run a neo4j db container locally
+
+## Using docker
 
 ```
 docker run --rm --name neo4j -p 7687:7687 -p 7474:7474 -d --env NEO4J_AUTH=neo4j/password neo4j:latest
@@ -12,3 +14,17 @@ To access the neo4j container
 docker exec -it neo4j bin/cypher-shell -u neo4j -p password
 
 ```
+
+
+# Use the query service
+
+From `query-service`
+
+```
+bun run src/manual_mode [uri] [username] [password] [output filename]
+```
+
+`uri` will default to `localhost:7687`
+`username` will default to `neo4j`
+`password` will default to `password`
+`output filename` will default to `output.json`