VirHostMatcher-Net runs wish too
This is true, at least with the --short-contig
option.
Results for wish and in the tmp dir of vhmnet are identical
$ diff -s results/SRR6797236/wish/prediction.list results/SRR6797236/vhmnet/tmp/prediction.list
Files results/SRR6797236/wish/prediction.list and results/SRR6797236/vhmnet/tmp/prediction.list are identical
Should I
- Completely remove the wish rules and get the output straight from vhmnet?
- Keep it as some sort of backup?